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An S4 class representing the evaluation of a learning method by repeated sampling.

Constructor for the S4 Renoir object.

Usage

Renoir(
  id = character(),
  config = character(),
  response = character(),
  nout = integer(),
  grid = integer(),
  k = integer(),
  sampling = character(),
  learning = character(),
  screening = character(),
  scoring = character(),
  filter = Filtered(),
  evaluation = EvaluatedList(),
  stability = list(),
  marks = MarkedList(),
  nbest = data.frame(),
  call = list()
)

Arguments

id

evaluated learning method

config

name of the configuration

response

response type

nout

the number of responses

grid

integer vector, the considered training set sizes

k

integer, the number of sampling repeats

sampling

string, sampling method used for evaluation

learning

string, the learning procedure (i.e. training or tuning)

screening

string, the feature screening strategy adopted

scoring

string, the accuracy measure(s) used during the evaluation

filter

a Filtered object containing the summary of the pre-processing

evaluation

a EvaluatedList object containing the evaluation of the learning method

stability

list, containing the features stability for each response, i.e. the frequency of features recruitment per response across all the computed models

marks

a MarkedList object containing the features importance

nbest

data.frame, it contains the indices of the automatically selected best training set size for different settings (e.g. assessment on training, testing, full set of data)

call

list, containing the arguments to the "renoir" function call that creates the Renoir object

Value

a Renoir object

Slots

id

a character string

config

a character string

response

a character string

nout

a one-length integer vector

grid

a integer vector

k

a one-length integer vector

sampling

a character string

learning

a character string

screening

a character string

scoring

a character string

filter

a Filtered object

evaluation

a EvaluatedList object

stability

a list object

marks

a MarkedList object

nbest

a data.frame object

call

list

See also

Renoir

Author

Alessandro Barberis